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mixs:source mat id |
Has query "Has query" is a predefined property that represents meta information (in form of a subobject) about individual queries.
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Has improper value for "Has improper value for" is a predefined property to track input errors for irregular value annotations that was likely caused by type or allowed value restrictions.
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Imported from + |
Classes | Concept , MIxS |
Modification date This property is a special property in this wiki.
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2 June 2015 12:26:31 + |
Page has default form This property is a special property in this wiki.
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Concept + |
dc:language | en + |
dcterms:identifier | http://gensc.org/ns/mixs/source_mat_id + |
sioc:has discussion | http://terms.tdwg.org/wiki/Talk:mixs:source_mat_id + |
skos:definition |
en:A unique identifier assigned to a mater … en:A unique identifier assigned to a material sample (as defined by http://rs.tdwg.org/dwc/terms/materialSampleID, and as opposed to a particular digital record of a material sample) used for extracting nucleic acids, and subsequent sequencing. The identifier can refer either to the original material collected or to any derived sub-samples. The INSDC qualifiers /specimen_voucher, /bio_material, or /culture_collection may or may not share the same value as the source_mat_id field. For instance, the /specimen_voucher qualifier and source_mat_id may both contain 'UAM:Herps:14' , referring to both the specimen voucher and sampled tissue with the same identifier. However, the /culture_collection qualifier may refer to a value from an initial culture (e.g. ATCC:11775) while source_mat_id would refer to an identifier from some derived culture from which the nucleic acids were extracted (e.g. xatc123 or ark:/2154/R2) e extracted (e.g. xatc123 or ark:/2154/R2) +
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skos:exactMatch | http://terms.tdwg.org/wiki/dwc:materialSampleID + |
skos:inScheme | MIxS + |
skos:prefLabel | en:source material identifiers + |
terms-internal:enConcept2LocalAnchor-conceptName | [[#mixs:source mat id|mixs:source mat id]] + |
terms-internal:enDefinition |
A unique identifier assigned to a material … A unique identifier assigned to a material sample (as defined by http://rs.tdwg.org/dwc/terms/materialSampleID, and as opposed to a particular digital record of a material sample) used for extracting nucleic acids, and subsequent sequencing. The identifier can refer either to the original material collected or to any derived sub-samples. The INSDC qualifiers /specimen_voucher, /bio_material, or /culture_collection may or may not share the same value as the source_mat_id field. For instance, the /specimen_voucher qualifier and source_mat_id may both contain 'UAM:Herps:14' , referring to both the specimen voucher and sampled tissue with the same identifier. However, the /culture_collection qualifier may refer to a value from an initial culture (e.g. ATCC:11775) while source_mat_id would refer to an identifier from some derived culture from which the nucleic acids were extracted (e.g. xatc123 or ark:/2154/R2) e extracted (e.g. xatc123 or ark:/2154/R2) +
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terms-internal:enLabel | source material identifiers + |
terms-internal:enLabel2LocalAnchor-conceptName | [[#mixs:source mat id|source material identifiers]] + |
terms-internal:enLabel2Pagename | [[mixs:source mat id|source material identifiers]] + |
terms-internal:has vannTermGroup | true + |
terms-internal:lowercasePagename | mixs:source mat id + |
terms-internal:pagename | mixs:source mat id + |
terms-internal:summary (as table rows) of concept term |
[[SMW::off]]
<tr id="mixs:source mat id … [[SMW::off]]
<tr id="mixs:source mat id">
<td id="source_material_identifiers" width="100px" style="text-align:right; vertical-align:bottom;background:#EEE; border-bottom: 1px solid #CCC; padding:1.1em 0.5em 0.5em 0.5em;">Concept Name:</td>
<td style="text-align:left; vertical-align:bottom;background:#EEE;border-right: 1px solid #CCC; border-bottom: 1px solid #CCC; padding:1.1em 0.5em 0.5em 0.5em;">'''[[mixs:source mat id]]'''</td>
</tr><tr>
<td style="text-align:right;vertical-align:top;background:#EEE;border-right:1px solid #CCC; border-bottom: 1px solid #CCC; padding:0.5em;">Normative URI</td>
<td style="border-right: 1px solid #CCC; border-bottom: 1px solid #CCC; padding:0.5em;">http://gensc.org/ns/mixs/source_mat_id</td>
</tr><tr>
<td style="text-align:right;vertical-align:top;background:#EEE;border-right:1px solid #CCC; border-bottom: 1px solid #CCC; padding:0.5em;">Label</td>
<td style="border-right: 1px solid #CCC; border-bottom: 1px solid #CCC; padding:0.5em;">source material identifiers</td>
</tr><tr>
<td style="text-align:right;vertical-align:top;background:#EEE;border-right:1px solid #CCC; border-bottom: 1px solid #CCC; padding:0.5em;">Definition</td>
<td style="border-right: 1px solid #CCC; border-bottom: 1px solid #CCC; padding:0.5em;">A unique identifier assigned to a material sample (as defined by http://rs.tdwg.org/dwc/terms/materialSampleID, and as opposed to a particular digital record of a material sample) used for extracting nucleic acids, and subsequent sequencing. The identifier can refer either to the original material collected or to any derived sub-samples. The INSDC qualifiers /specimen_voucher, /bio_material, or /culture_collection may or may not share the same value as the source_mat_id field. For instance, the /specimen_voucher qualifier and source_mat_id may both contain 'UAM:Herps:14' , referring to both the specimen voucher and sampled tissue with the same identifier. However, the /culture_collection qualifier may refer to a value from an initial culture (e.g. ATCC:11775) while source_mat_id would refer to an identifier from some derived culture from which the nucleic acids were extracted (e.g. xatc123 or ark:/2154/R2)</td>
</tr><tr>
<td style="text-align:right;vertical-align:top;background:#EEE;border-right:1px solid #CCC; border-bottom: 1px solid #CCC; padding:0.5em;">Defined By</td>
<td style="border-right: 1px solid #CCC; border-bottom: 1px solid #CCC; padding:0.5em;"></td>
</tr><tr>
<td style="text-align:right;vertical-align:top;background:#EEE;border-right:1px solid #CCC; border-bottom: 1px solid #CCC; padding:0.5em;"> </td>
<td style="border-right: 1px solid #CCC; border-bottom: 1px solid #CCC; padding:0.5em;">'''Required: ''' No — '''Repeatable: ''' No<span class="debug-required-repeatable" style="display:none;">http://gensc.org/ns/mixs/source_mat_id, </span></td>
</tr>[[SMW::on]] span></td>
</tr>[[SMW::on]] +
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vann:termGroup | MIxS Nucleic Acid Sequence Source Vocabulary + |
vann:usageNote | http://terms.tdwg.org/w/index.php?title=mixs:source_mat_id&oldid=36832 + |
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