Difference between revisions of "mixs:finishing strategy"

Revision as of 11:32, 28 May 2014 (view source) Gabi Dröge (Talk | contribs) ← Older edit		Latest revision as of 09:48, 2 February 2016 (view source) Pelin Yilmaz (Talk | contribs)
(5 intermediate revisions by 2 users not shown)
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	{{Concept		{{Concept
−	|label=Finishing Strategy	+	|label=finishing strategy
	|definition=Was the genome project intended to produce a complete or draft genome, Coverage, the fold coverage of the sequencing expressed as 2x, 3x, 18x  etc, and how many contigs were produced for the genome		|definition=Was the genome project intended to produce a complete or draft genome, Coverage, the fold coverage of the sequencing expressed as 2x, 3x, 18x  etc, and how many contigs were produced for the genome
	|concept type=property		|concept type=property
Line 6:		Line 6:
	{{Concept scheme relation		{{Concept scheme relation
	|scheme=GGBN Data Standard		|scheme=GGBN Data Standard
−	|property cardinality=0..1	+	|property cardinality=0..n
	}}		}}
	{{Concept scheme relation		{{Concept scheme relation
	|scheme=MIxS		|scheme=MIxS
−	|property cardinality=0..1
	}}		}}
	{{Concept relation		{{Concept relation
Line 16:		Line 15:
	|internal page=GGBN Amplification Vocabulary		|internal page=GGBN Amplification Vocabulary
	}}		}}
		+	{{Concept relation
		+	|relation=skos: collection
		+	|internal page=MIxS Sequencing
		+	}}
		+	'''Expected value: ''' status; coverage; number of contigs
		+
		+	'''Requirements (eu, ba, pl, vi, org, me, MIMARKS Survey, MIMARKS Specimen):''' M M X X X X - -
		+
		+	'''Value syntax:''' [complete|draft];{integer};{integer}

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Latest revision as of 09:48, 2 February 2016

Schemes: GGBN Data Standard , MIxS 
Collections: GGBN Amplification Vocabulary , MIxS Sequencing 

finishing strategy No type definition was found for "finishing_strategy" in the mixs import. URI: http://gensc.org/ns/mixs/finishing_strategy

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finishing strategy: Was the genome project intended to produce a complete or draft genome, Coverage, the fold coverage of the sequencing expressed as 2x, 3x, 18x etc, and how many contigs were produced for the genome

Constraints in the context of GGBN Data Standard:

• cardinality 0..n (=optional multiple occurrence)

Expected value: status; coverage; number of contigs

Requirements (eu, ba, pl, vi, org, me, MIMARKS Survey, MIMARKS Specimen): M M X X X X - -

Value syntax: [complete|draft];{integer};{integer}