Difference between revisions of "dwc:associatedSequences"

From TDWG Terms Wiki
Jump to: navigation, search
Line 3: Line 3:
 
|definition=A list (concatenated and separated) of identifiers (publication, global unique identifier, URI) of genetic sequence information associated with the Occurrence.
 
|definition=A list (concatenated and separated) of identifiers (publication, global unique identifier, URI) of genetic sequence information associated with the Occurrence.
 
|example=Example: "GenBank: U34853.1".
 
|example=Example: "GenBank: U34853.1".
|notes=For discussion see http://code.google.com/p/darwincore/wiki/Occurrence
+
|notes=A semicolon delimited list of sequence identifiers with an optional prefix to indicate their origin. If the prefix is omitted it should be a well known identifier format from one of the INSDC databases (International Nucleotide Sequence Database Collaboration), see http://www.ddbj.nig.ac.jp/sub/acc_def-e.html Examples would be:
 +
 
 +
AB425960;AB425963;DQ286547
 +
 
 +
For other sequence identifiers a prefix indicating the source or a full URL is desirable. The individual INSDC sequence read archives should be prefixed with the following:
 +
 
 +
* SRA: NCBI Sequence Read Archive
 +
* DRA: DDBJ Sequence Read Archive
 +
* ERA: EMBL Sequence Read Archive
 
|is defined by=http://rs.tdwg.org/dwc/terms/
 
|is defined by=http://rs.tdwg.org/dwc/terms/
 
|concept type=property
 
|concept type=property

Revision as of 14:24, 26 September 2013

Scheme: Darwin Core Pencil.png
Collection: Darwin Core Occurrence Pencil.png
Associated Sequences
Status:recommended
Issued:2008/11/19
Modified:2009/04/24
Search for values Crystal Clear action find.png
Associated Sequences: A list (concatenated and separated) of identifiers (publication, global unique identifier, URI) of genetic sequence information associated with the Occurrence.

Notes: A semicolon delimited list of sequence identifiers with an optional prefix to indicate their origin. If the prefix is omitted it should be a well known identifier format from one of the INSDC databases (International Nucleotide Sequence Database Collaboration), see http://www.ddbj.nig.ac.jp/sub/acc_def-e.html Examples would be:

AB425960;AB425963;DQ286547

For other sequence identifiers a prefix indicating the source or a full URL is desirable. The individual INSDC sequence read archives should be prefixed with the following:

  • SRA: NCBI Sequence Read Archive
  • DRA: DDBJ Sequence Read Archive
  • ERA: EMBL Sequence Read Archive

Example(s): Example: "GenBank: U34853.1".

Translations

中文(简体)‎ (Simplified Chinese)
相关序列: 与发现情况相关之基因序列信息的(发表、全局唯一标识符、统一资源标识符等)标识符之(连接的或分开的)列表。
日本語 (Japanese)
Associated Sequences: 関連する配列情報のID(出版物、GUID、URIなど)のリスト。
Español (Spanish)
Secuencias asociadas: Una lista (concatenada y separada) de los identificadores (publicación, identificador único global, URI) de la información de la secuencia genética asociada con el Registro Biológico.
Ejemplo: "Banco de Genes: U34853.1"
Français (French)
Séquences associées: Une liste (concaténée et séparée) d'identifiants (publication, identifiant unique global, URI) de l'information sur la séquence génétique associée à l'occurrence.
Exemple: "GenBank: U34853.1".
Notes: Voir la page http://code.google.com/p/darwincore/wiki/Occurrence