Difference between revisions of "GGBN Data Standard"
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{{!}} [[#ggbn:ggbn:ratioOfAbsorbance260_230 | ggbn:ratioOfAbsorbance260_230]] {{!}} | {{!}} [[#ggbn:ggbn:ratioOfAbsorbance260_230 | ggbn:ratioOfAbsorbance260_230]] {{!}} | ||
{{!}} [[#ggbn:ggbn:ratioOfAbsorbance260_280 | ggbn:ratioOfAbsorbance260_280]] {{!}} | {{!}} [[#ggbn:ggbn:ratioOfAbsorbance260_280 | ggbn:ratioOfAbsorbance260_280]] {{!}} | ||
| + | |||
| + | '''Amplification Vocabulary''' | ||
| + | |||
| + | {{!}} [[#ggbn:amplificationDate | ggbn:amplificationDate]] {{!}} | ||
| + | {{!}} [[#ggbn:amplificationStaff | ggbn:amplificationStaff]] {{!}} | ||
| + | {{!}} [[#ggbn:amplificationSuccess | ggbn:amplificationSuccess]] {{!}} | ||
| + | {{!}} [[#ggbn:amplificationSuccessDetails | ggbn:amplificationSuccessDetails]] {{!}} | ||
| + | {{!}} [[#ggbn:purificationMethod | ggbn:purificationMethod]] {{!}} | ||
| + | {{!}} [[#ggbn:consensusSequence | ggbn:consensusSequence]] {{!}} | ||
| + | {{!}} [[#ggbn:consensusSequenceLength | ggbn:consensusSequenceLength]] {{!}} | ||
| + | {{!}} [[#ggbn:consensusSequenceChromatogramFileURI | ggbn:consensusSequenceChromatogramFileURI]] {{!}} | ||
| + | {{!}} [[#ggbn:barcodeSequence | ggbn:barcodeSequence]] {{!}} | ||
| + | {{!}} [[#ggbn:haplotype | ggbn:haplotype]] {{!}} | ||
| + | {{!}} [[#ggbn:primerName | ggbn:primerName (ABCD)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerNameForward | ggbn:primerNameForward (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerNameReverse | ggbn:primerNameReverse (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerReferenceCitation | ggbn:primerReferenceCitation (ABCD)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerReferenceCitationForward | ggbn:primerReferenceCitationForward (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerReferenceCitationReverse | ggbn:primerReferenceCitationReverse (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerReferenceLink | ggbn:primerReferenceLink (ABCD)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerReferenceLinkForward | ggbn:primerReferenceLinkForward (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerReferenceLinkReverse | ggbn:primerReferenceLinkReverse (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerSequence | ggbn:primerSequence (ABCD)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerSequenceForward | ggbn:primerSequenceForward (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerSequenceReverse | ggbn:primerSequenceReverse (DwC)]] {{!}} | ||
| + | |||
| + | '''DNA Cloning Vocabulary''' | ||
| + | |||
| + | {{!}} [[#ggbn:cloningDate | ggbn:cloningDate]] {{!}} | ||
| + | {{!}} [[#ggbn:cloningStaff | ggbn:cloningStaff]] {{!}} | ||
| + | {{!}} [[#ggbn:cloningMethod | ggbn:cloningMethod]] {{!}} | ||
| + | {{!}} [[#ggbn:cloneStrain | ggbn:cloneStrain]] {{!}} | ||
| + | {{!}} [[#ggbn:primerName | ggbn:primerName (ABCD)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerNameForward | ggbn:primerNameForward (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerNameReverse | ggbn:primerNameReverse (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerReferenceCitation | ggbn:primerReferenceCitation (ABCD)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerReferenceCitationForward | ggbn:primerReferenceCitationForward (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerReferenceCitationReverse | ggbn:primerReferenceCitationReverse (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerReferenceLink | ggbn:primerReferenceLink (ABCD)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerReferenceLinkForward | ggbn:primerReferenceLinkForward (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerReferenceLinkReverse | ggbn:primerReferenceLinkReverse (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerSequence | ggbn:primerSequence (ABCD)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerSequenceForward | ggbn:primerSequenceForward (DwC)]] {{!}} | ||
| + | {{!}} [[#ggbn:primerSequenceReverse | ggbn:primerSequenceReverse (DwC)]] {{!}} | ||
== Implementations == | == Implementations == | ||
== References == | == References == | ||
Revision as of 13:56, 20 May 2014
The GGBN Data Standard is a set of vocabularies designed to represent tissue, DNA or RNA samples associated to voucher specimens and collections. Contributors: xxx.
Introduction
GGBN Data Standard Terms
DNA/RNA Vocabulary
| dwc:materialSampleID | | ggbn:purificationMethod | | ggbn:ratioOfAbsorbance260_230 | | ggbn:ratioOfAbsorbance260_280 |
Amplification Vocabulary
| ggbn:amplificationDate | | ggbn:amplificationStaff | | ggbn:amplificationSuccess | | ggbn:amplificationSuccessDetails | | ggbn:purificationMethod | | ggbn:consensusSequence | | ggbn:consensusSequenceLength | | ggbn:consensusSequenceChromatogramFileURI | | ggbn:barcodeSequence | | ggbn:haplotype | | ggbn:primerName (ABCD) | | ggbn:primerNameForward (DwC) | | ggbn:primerNameReverse (DwC) | | ggbn:primerReferenceCitation (ABCD) | | ggbn:primerReferenceCitationForward (DwC) | | ggbn:primerReferenceCitationReverse (DwC) | | ggbn:primerReferenceLink (ABCD) | | ggbn:primerReferenceLinkForward (DwC) | | ggbn:primerReferenceLinkReverse (DwC) | | ggbn:primerSequence (ABCD) | | ggbn:primerSequenceForward (DwC) | | ggbn:primerSequenceReverse (DwC) |
DNA Cloning Vocabulary
| ggbn:cloningDate | | ggbn:cloningStaff | | ggbn:cloningMethod | | ggbn:cloneStrain | | ggbn:primerName (ABCD) | | ggbn:primerNameForward (DwC) | | ggbn:primerNameReverse (DwC) | | ggbn:primerReferenceCitation (ABCD) | | ggbn:primerReferenceCitationForward (DwC) | | ggbn:primerReferenceCitationReverse (DwC) | | ggbn:primerReferenceLink (ABCD) | | ggbn:primerReferenceLinkForward (DwC) | | ggbn:primerReferenceLinkReverse (DwC) | | ggbn:primerSequence (ABCD) | | ggbn:primerSequenceForward (DwC) | | ggbn:primerSequenceReverse (DwC) |
